Technically can't put a R pipe in. You can not change the cat for no reason (failure is the only valid reason?). And if you swap, it needs to be the stock one which has a smaller outlet than the R pipe. That's the rule, if you're gonna follow it.You can run the stock R DP on that tune with no issue (think of it as really a stage 1 tune for the R). Still would need to flash back to stock for smog regardless.
If this gets bad, my back out plan is to put my APR tune back in and run a JB4 and laugh at all the Fkrs that talk shit about the JB4.